Julia Ruta

Proteome-scale recombinant standards and a robust high-speed search engine to advance cross-linking MS-based interactomics

• Milan Avila Clasen; Max Ruwolt; Cong Wang; Julia Ruta; Boris Bogdanow; Louise U. Kurt; Zehong Zhang; Shuai Wang; Fabio C. Gozzo; Tao Chen; Paulo C. Carvalho; Diogo Borges Lima; Fan Liu

Nature Methods 2024

Molecular architecture of synaptic vesicles

• Uljana Kravčenko; Max Ruwolt; Jana Kroll; Artsemi Yushkevich; Martina Zenkner; Julia Ruta; Rowaa Lotfy; Erich E. Wanker; Christian Rosenmund; Fan Liu; Mikhail Kudryashev

Proceedings of the National Academy of Sciences 2024

Redesigning error control in cross-linking mass spectrometry enables more robust and sensitive protein-protein interaction studies

• Boris Bogdanow; Max Ruwolt; Julia Ruta; Lars Mühlberg; Cong Wang; Wen-feng Zeng; Arne Elofsson; Fan Liu

Molecular Systems Biology 2024

Yeast TLDc domain proteins regulate assembly state and subcellular localization of the V-ATPase

• Samira Klössel; Ying Zhu; Lucia Amado; Daniel D Bisinski; Julia Ruta; Fan Liu; Ayelén González Montoro

The EMBO Journal 2024

Molecular architecture of synaptic vesicles

• Uljana Kravcenko; Max Ruwolt; Jana Kroll; Artsemi Yushkevich; Martina Zenkner; Julia Ruta; Rowaa Lotfy; Erich E. Wanker; Christian Rosenmund; Fan Liu; Mikhail Kudryashev

Cross-link assisted spatial proteomics to map sub-organelle proteomes and membrane protein topologies

• Ying Zhu; Kerem Can Akkaya; Julia Ruta; Nanako Yokoyama; Cong Wang; Max Ruwolt; Diogo Borges Lima; Martin Lehmann; Fan Liu

Nature Communications 2024