Max Ruwolt

AIRPred: A Deep Learning Model Predictor for Peptide Intensity Ratios in Cross-Linking Mass Spectrometry Improves Cross-Link Spectrum Matching

• Zehong Zhang; Mei Wu; Max Ruwolt; Ying Zhu; Pin-Lian Jiang; Diogo Borges Lima; Fan Liu

Analytical Chemistry 2025

Membrane protein condensates polymerize actin and form filopodia

• Shannon Bareesel; Thomas J. Böddeker; Willem Bintig; Domonkos Nagy-Herczeg; Max Ruwolt; Vasiliki Syropoulou; Cristina Kroon; Patricia Kreis; Susanne Wegmann; Michal Szczepek; Christian M.T. Spahn; Patrick Scheerer; George Leondaritis; Fan Liu; Roland L. Knorr; Britta J. Eickholt

Calcium Competitive Inhibition of Langerin by Thiazolopyrimidinones

• Yunzhan Ning; Nina-Louisa Efrém; Machoud Amoussa; Ertan Turhan; Dazhong Zheng; Jonathan Lefèbre; Max Ruwolt; Ursula Neu; Maurice Besch; Bernhard Loll; Dennis Kurzbach; Jesko Köhnke; Marc Nazaré; Christoph Rademacher

Journal of Medicinal Chemistry 2025

Nucleoside diphosphate kinase A (NME1) catalyses its own oligophosphorylation

• Arif Celik; Felix Schöpf; Christian E. Stieger; Sarah Lampe; Björn Hanf; Jeremy A. M. Morgan; Max Ruwolt; Fan Liu; Christian P. R. Hackenberger; Daniel Roderer; Dorothea Fiedler

Nature Chemistry 2025

Sociality shapes mitochondrial adaptations supporting hypoxia tolerance

• Alice Rossi; Max Ruwolt; Paraskevi Kakouri; Tetiana Kosten; Severine Kunz; Dmytro Puchkov; Jane Reznick; Bettina Purfürst; Damir Omerbašić; Daniel Méndez Aranda; Giorgia Carai; Guido Mastrobuoni; Daniel W. Hart; Michela Carraro; Ludovica Tommasin; Nigel C. Bennett; Valérie Bégay; Katja Faelber; Oliver Daumke; Paolo Bernardi; Thomas J. Park; Stefan Kempa; Fan Liu; Gary R. Lewin

Proteome-scale recombinant standards and a robust high-speed search engine to advance cross-linking MS-based interactomics

• Milan Avila Clasen; Max Ruwolt; Cong Wang; Julia Ruta; Boris Bogdanow; Louise U. Kurt; Zehong Zhang; Shuai Wang; Fabio C. Gozzo; Tao Chen; Paulo C. Carvalho; Diogo Borges Lima; Fan Liu

Nature Methods 2024

Molecular architecture of synaptic vesicles

• Uljana Kravčenko; Max Ruwolt; Jana Kroll; Artsemi Yushkevich; Martina Zenkner; Julia Ruta; Rowaa Lotfy; Erich E. Wanker; Christian Rosenmund; Fan Liu; Mikhail Kudryashev

Proceedings of the National Academy of Sciences 2024

Redesigning error control in cross-linking mass spectrometry enables more robust and sensitive protein-protein interaction studies

• Boris Bogdanow; Max Ruwolt; Julia Ruta; Lars Mühlberg; Cong Wang; Wen-feng Zeng; Arne Elofsson; Fan Liu

Molecular Systems Biology 2024

Cross-link assisted spatial proteomics to map sub-organelle proteomes and membrane protein topologies

• Ying Zhu; Kerem Can Akkaya; Julia Ruta; Nanako Yokoyama; Cong Wang; Max Ruwolt; Diogo Borges Lima; Martin Lehmann; Fan Liu

Nature Communications 2024

Extensive protein pyrophosphorylation revealed in human cell lines

• Jeremy A. M. Morgan; Arpita Singh; Leonie Kurz; Michal Nadler-Holly; Max Ruwolt; Shubhra Ganguli; Sheenam Sharma; Martin Penkert; Eberhard Krause; Fan Liu; Rashna Bhandari; Dorothea Fiedler

Nature Chemical Biology 2024

Lysis buffer selection guidance for mass spectrometry-based global proteomics including studies on the intersection of signal transduction and metabolism

• Barbara Helm; Pauline Hansen; Li Lai; Luisa Schwarzmüller; Simone M. Clas; Annika Richter; Max Ruwolt; Fan Liu; Dario Frey; Lorenza A. D’Alessandro; Wolf-Dieter Lehmann; Marcel Schilling; Dominic Helm; Dorothea Fiedler; Ursula Klingmüller

Proteome-wide quantification of inositol pyrophosphate-protein interactions

• Annika Richter; Max Ruwolt; Sarah Lampe; Fan Liu; David Furkert; Dorothea Fiedler